Information for motif16


Reverse Opposite:

p-value:1e-16
log p-value:-3.842e+01
Information Content per bp:1.624
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif2.84%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets27.6 +/- 13.2bp
Average Position of motif in Background42.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0146.2_Zfx/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GCCTGGRACTGA
GGGGCCGAGGCCTG-

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GCCTGGRACTGA
-CCAGGAACAG-

MA0524.1_TFAP2C/Jaspar

Match Rank:3
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GCCTGGRACTGA-
TGCCCTGGGGCNANN

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GCCTGGRACTGA
ATGCCCGGGCATGT

POL002.1_INR/Jaspar

Match Rank:5
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:GCCTGGRACTGA
----NNNANTGA

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GCCTGGRACTGA
-GCTGTG-----

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GCCTGGRACTGA
-ACAGGAAGTG-

PB0060.1_Smad3_1/Jaspar

Match Rank:8
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------GCCTGGRACTGA
NNTNNTGTCTGGNNTNG-

MA0473.1_ELF1/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GCCTGGRACTGA
GAACCAGGAAGTG-

MA0475.1_FLI1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GCCTGGRACTGA
-ACAGGAAGTGG