Information for motif18


Reverse Opposite:

p-value:1e-15
log p-value:-3.568e+01
Information Content per bp:1.719
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif4.85%
Number of Background Sequences with motif5.7
Percentage of Background Sequences with motif0.76%
Average Position of motif in Targets23.1 +/- 11.8bp
Average Position of motif in Background33.5 +/- 8.2bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0143.1_Klf7_2/Jaspar

Match Rank:1
Score:0.77
Offset:-3
Orientation:forward strand
Alignment:---CATMCGCC------
AAGCATACGCCCAACTT

POL003.1_GC-box/Jaspar

Match Rank:2
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CATMCGCC----
NAGCCCCGCCCCCN

PB0097.1_Zfp281_1/Jaspar

Match Rank:3
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----CATMCGCC---
TCCCCCCCCCCCCCC

PB0164.1_Smad3_2/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---CATMCGCC------
TACGCCCCGCCACTCTG

NRF1/Promoter/Homer

Match Rank:5
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CATMCGCC
GTGCGCATGCGC-

Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CATMCGCC
CCCCCCCC

MA0162.2_EGR1/Jaspar

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CATMCGCC------
CCCCCGCCCCCGCC

PB0124.1_Gabpa_2/Jaspar

Match Rank:8
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CATMCGCC----
CCGTCTTCCCCCTCAC

PB0076.1_Sp4_1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CATMCGCC--------
GGTCCCGCCCCCTTCTC

MA0079.3_SP1/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CATMCGCC---
GCCCCGCCCCC