Information for motif2


Reverse Opposite:

p-value:1e-27
log p-value:-6.305e+01
Information Content per bp:1.706
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif5.02%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets23.9 +/- 11.1bp
Average Position of motif in Background23.7 +/- 4.6bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0097.1_Zfp281_1/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CCHCAGCMCMCM--
TCCCCCCCCCCCCCC

PB0100.1_Zfp740_1/Jaspar

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CCHCAGCMCMCM----
CCCCCCCCCCCACTTG

MA0162.2_EGR1/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CCHCAGCMCMCM--
CCCCCGCCCCCGCC

MA0599.1_KLF5/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CCHCAGCMCMCM
GCCCCGCCCC---

MA0504.1_NR2C2/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---CCHCAGCMCMCM
TGACCTCTGACCCCN

MA0511.1_RUNX2/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CCHCAGCMCMCM
CAAACCACAAACCCC-

MA0079.3_SP1/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CCHCAGCMCMCM
GCCCCGCCCCC--

MA0073.1_RREB1/Jaspar

Match Rank:8
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CCHCAGCMCMCM--------
CCCCAAACCACCCCCCCCCA

PB0208.1_Zscan4_2/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CCHCAGCMCMCM-----
-CGAAGCACACAAAATA

POL003.1_GC-box/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CCHCAGCMCMCM
NAGCCCCGCCCCCN