Information for motif20


Reverse Opposite:

p-value:1e-15
log p-value:-3.533e+01
Information Content per bp:1.673
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.68%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets22.9 +/- 14.5bp
Average Position of motif in Background14.2 +/- 3.4bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0463.1_Bcl6/Jaspar

Match Rank:1
Score:0.77
Offset:-1
Orientation:forward strand
Alignment:-TTYCTAGA-----
TTTCCTAGAAAGCA

PB0006.1_Bcl6b_1/Jaspar

Match Rank:2
Score:0.74
Offset:-4
Orientation:reverse strand
Alignment:----TTYCTAGA----
NNNATTCCTCGAAAGN

MA0519.1_Stat5a::Stat5b/Jaspar

Match Rank:3
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--TTYCTAGA-
ATTTCCAAGAA

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:4
Score:0.72
Offset:-1
Orientation:reverse strand
Alignment:-TTYCTAGA------
TTTCCTGGAAAGNNN

MA0137.3_STAT1/Jaspar

Match Rank:5
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TTYCTAGA--
TTTCCTGGAAA

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:6
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--TTYCTAGA--
NTTTCTNAGAAA

PB0090.1_Zbtb12_1/Jaspar

Match Rank:7
Score:0.69
Offset:-5
Orientation:forward strand
Alignment:-----TTYCTAGA----
CTAAGGTTCTAGATCAC

MA0144.2_STAT3/Jaspar

Match Rank:8
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-TTYCTAGA--
TTTCCCAGAAN

MA0518.1_Stat4/Jaspar

Match Rank:9
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----TTYCTAGA--
NNNTTTCCTGGAAA

STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer

Match Rank:10
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--TTYCTAGA----
ATTTCCNGGAAATN