Information for motif21


Reverse Opposite:

p-value:1e-15
log p-value:-3.491e+01
Information Content per bp:1.689
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif3.34%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.39%
Average Position of motif in Targets22.4 +/- 12.1bp
Average Position of motif in Background37.9 +/- 6.6bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0029.1_Hic1_1/Jaspar

Match Rank:1
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---GGGTTGGCGT---
NGTAGGTTGGCATNNN

MA0161.1_NFIC/Jaspar

Match Rank:2
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GGGTTGGCGT
---TTGGCA-

Egr2/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GGGTTGGCGT-
NGCGTGGGCGGR

MA0133.1_BRCA1/Jaspar

Match Rank:4
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GGGTTGGCGT
GTGTTGN---

PB0098.1_Zfp410_1/Jaspar

Match Rank:5
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------GGGTTGGCGT-
TATTATGGGATGGATAA

PB0110.1_Bcl6b_2/Jaspar

Match Rank:6
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----GGGTTGGCGT-
NNTNAGGGGCGGNNNN

PB0076.1_Sp4_1/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GGGTTGGCGT----
NNNAAGGGGGCGGGNNN

MA0472.1_EGR2/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GGGTTGGCGT---
GTGCGTGGGCGGGNG

Srebp2(HLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:GGGTTGGCGT-----
---GTGGCGTGACNG

MF0002.1_bZIP_CREB/G-box-like_subclass/Jaspar

Match Rank:10
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GGGTTGGCGT
----TGACGT