Information for motif23


Reverse Opposite:

p-value:1e-15
log p-value:-3.491e+01
Information Content per bp:1.560
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif3.34%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets20.9 +/- 10.2bp
Average Position of motif in Background28.2 +/- 9.5bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:1
Score:0.62
Offset:3
Orientation:forward strand
Alignment:GAGGTTTCWCAG-
---HTTTCCCASG

POL009.1_DCE_S_II/Jaspar

Match Rank:2
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:GAGGTTTCWCAG-
-------CACAGN

MA0519.1_Stat5a::Stat5b/Jaspar

Match Rank:3
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GAGGTTTCWCAG--
---ATTTCCAAGAA

STAT6/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:4
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GAGGTTTCWCAG--
----TTCCKNAGAA

PB0013.1_Eomes_1/Jaspar

Match Rank:5
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:GAGGTTTCWCAG------
-NNTTTTCACACCTTNNN

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GAGGTTTCWCAG
-TGGTTTCAGT-

MA0105.3_NFKB1/Jaspar

Match Rank:7
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-GAGGTTTCWCAG
GGGAATTTCCC--

MA0144.2_STAT3/Jaspar

Match Rank:8
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:GAGGTTTCWCAG---
----TTTCCCAGAAN

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:9
Score:0.51
Offset:3
Orientation:forward strand
Alignment:GAGGTTTCWCAG---
---NTTTCTNAGAAA

CHR/Cell-Cycle-Exp/Homer

Match Rank:10
Score:0.51
Offset:1
Orientation:forward strand
Alignment:GAGGTTTCWCAG
-CGGTTTCAAA-