Information for motif29


Reverse Opposite:

p-value:1e-12
log p-value:-2.975e+01
Information Content per bp:1.775
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif3.51%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.42%
Average Position of motif in Targets23.6 +/- 11.9bp
Average Position of motif in Background13.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0133.1_BRCA1/Jaspar

Match Rank:1
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:GKGWRGGTTGTG
----GTGTTGN-

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:2
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GKGWRGGTTGTG---
---NTGGGTGTGGCC

MA0493.1_Klf1/Jaspar

Match Rank:3
Score:0.63
Offset:4
Orientation:reverse strand
Alignment:GKGWRGGTTGTG---
----TGGGTGTGGCN

PB0161.1_Rxra_2/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GKGWRGGTTGTG--
TCGCGAAGGTTGTACT

ETS:RUNX/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:5
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GKGWRGGTTGTG--
--ACAGGATGTGGT

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:GKGWRGGTTGTG--
----TGGGTGTGGC

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:7
Score:0.58
Offset:4
Orientation:forward strand
Alignment:GKGWRGGTTGTG--
----DGGGYGKGGC

MA0511.1_RUNX2/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GKGWRGGTTGTG-----
--GGGGTTTGTGGTTTG

PB0120.1_Foxj1_2/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GKGWRGGTTGTG----
-GTNTTGTTGTGANNT

MA0027.1_En1/Jaspar

Match Rank:10
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GKGWRGGTTGTG---
----AAGTAGTGCCC