Information for motif31


Reverse Opposite:

p-value:1e-11
log p-value:-2.753e+01
Information Content per bp:1.759
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif3.34%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.44%
Average Position of motif in Targets20.4 +/- 10.5bp
Average Position of motif in Background24.6 +/- 5.3bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:1
Score:0.75
Offset:0
Orientation:reverse strand
Alignment:GATGGAAAAA
AATGGAAAAT

MA0152.1_NFATC2/Jaspar

Match Rank:2
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:GATGGAAAAA
--TGGAAAA-

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-GATGGAAAAA---
TACTGGAAAAAAAA

PB0182.1_Srf_2/Jaspar

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GATGGAAAAA-------
GTTAAAAAAAAAAATTA

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GATGGAAAAA
ATGATGCAAT--

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GATGGAAAAA
MTGATGCAAT--

NFAT:AP1/Jurkat-NFATC1-ChIP-Seq(Jolma et al.)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GATGGAAAAA---------
NANTGGAAAAANTGAGTCAN

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-GATGGAAAAA
GGCGGGAARN-

MA0471.1_E2F6/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GATGGAAAAA
GGGCGGGAAGG-

PB0145.1_Mafb_2/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GATGGAAAAA---
CAATTGCAAAAATAT