Information for motif35


Reverse Opposite:

p-value:1e-10
log p-value:-2.496e+01
Information Content per bp:1.530
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif2.68%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.40%
Average Position of motif in Targets24.4 +/- 13.8bp
Average Position of motif in Background25.4 +/- 11.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:1
Score:0.77
Offset:1
Orientation:forward strand
Alignment:CCGGCCTA-
-AGGCCTAG

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-CCGGCCTA
CNAGGCCT-

MA0146.2_Zfx/Jaspar

Match Rank:3
Score:0.69
Offset:-6
Orientation:forward strand
Alignment:------CCGGCCTA
GGGGCCGAGGCCTG

PB0164.1_Smad3_2/Jaspar

Match Rank:4
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CCGGCCTA----
TACGCCCCGCCACTCTG

MA0516.1_SP2/Jaspar

Match Rank:5
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CCGGCCTA-----
GCCCCGCCCCCTCCC

MA0028.1_ELK1/Jaspar

Match Rank:6
Score:0.55
Offset:-3
Orientation:reverse strand
Alignment:---CCGGCCTA
CTTCCGGNNN-

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----CCGGCCTA
NRYTTCCGGY---

PB0180.1_Sp4_2/Jaspar

Match Rank:8
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----CCGGCCTA--
NNGGCCACGCCTTTN

MA0471.1_E2F6/Jaspar

Match Rank:9
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CCGGCCTA
NCTTCCCGCCC-

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---CCGGCCTA
NNACTTGCCTT