| p-value: | 1e-10 |
| log p-value: | -2.326e+01 |
| Information Content per bp: | 1.677 |
| Number of Target Sequences with motif | 18.0 |
| Percentage of Target Sequences with motif | 3.01% |
| Number of Background Sequences with motif | 3.2 |
| Percentage of Background Sequences with motif | 0.42% |
| Average Position of motif in Targets | 23.1 +/- 12.0bp |
| Average Position of motif in Background | 25.2 +/- 9.3bp |
| Strand Bias (log2 ratio + to - strand density) | 0.2 |
| Multiplicity (# of sites on avg that occur together) | 1.00 |
| Motif File: | file (matrix)
reverse opposite |
| PDF Format Logos: | forward logo
reverse opposite |
MA0132.1_Pdx1/Jaspar
| Match Rank: | 1 |
| Score: | 0.86
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | CTAATGRR
CTAATT-- |
|
|
|
Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer
| Match Rank: | 2 |
| Score: | 0.83
| | Offset: | -1
| | Orientation: | forward strand |
| Alignment: | -CTAATGRR
GKTAATGR- |
|
|
|
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer
| Match Rank: | 3 |
| Score: | 0.78
| | Offset: | 0
| | Orientation: | forward strand |
| Alignment: | CTAATGRR
CTAATKGV |
|
|
|
Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer
| Match Rank: | 4 |
| Score: | 0.73
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -CTAATGRR
NCTAATTA- |
|
|
|
Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer
| Match Rank: | 5 |
| Score: | 0.73
| | Offset: | 0
| | Orientation: | reverse strand |
| Alignment: | CTAATGRR--
YTAATTAVHT |
|
|
|
MA0125.1_Nobox/Jaspar
| Match Rank: | 6 |
| Score: | 0.73
| | Offset: | 1
| | Orientation: | forward strand |
| Alignment: | CTAATGRR-
-TAATTGGT |
|
|
|
PH0151.1_Pou6f1_1/Jaspar
| Match Rank: | 7 |
| Score: | 0.72
| | Offset: | -4
| | Orientation: | forward strand |
| Alignment: | ----CTAATGRR-----
GACGATAATGAGCTTGC |
|
|
|
PB0135.1_Hoxa3_2/Jaspar
| Match Rank: | 8 |
| Score: | 0.72
| | Offset: | -2
| | Orientation: | reverse strand |
| Alignment: | --CTAATGRR----
CCTTAATNGNTTTT |
|
|
|
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer
| Match Rank: | 9 |
| Score: | 0.72
| | Offset: | -1
| | Orientation: | reverse strand |
| Alignment: | -CTAATGRR-
GTTAATGGCC |
|
|
|
PH0058.1_Hoxb3/Jaspar
| Match Rank: | 10 |
| Score: | 0.71
| | Offset: | -5
| | Orientation: | reverse strand |
| Alignment: | -----CTAATGRR----
TNNNACTAATTAGNTCA |
|
|
|
