Information for motif38


Reverse Opposite:

p-value:1e-9
log p-value:-2.096e+01
Information Content per bp:1.652
Number of Target Sequences with motif45.0
Percentage of Target Sequences with motif7.53%
Number of Background Sequences with motif20.8
Percentage of Background Sequences with motif2.75%
Average Position of motif in Targets21.6 +/- 11.6bp
Average Position of motif in Background27.2 +/- 8.1bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0164.1_Nr2e3/Jaspar

Match Rank:1
Score:0.76
Offset:0
Orientation:forward strand
Alignment:AAAGCTTT
CAAGCTT-

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:2
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:AAAGCTTT--
ACAGCTGTTV

MyoG(HLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:AAAGCTTT-
-CAGCTGTT

MA0521.1_Tcf12/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AAAGCTTT-
NNGCAGCTGTT

Ap4(HLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:AAAGCTTT--
HCAGCTGDTN

POL010.1_DCE_S_III/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AAAGCTTT
-CAGCC--

Ptf1a(HLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--AAAGCTTT
NAACAGCTGT

MyoD(HLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-AAAGCTTT---
AGCAGCTGCTNN

MA0500.1_Myog/Jaspar

Match Rank:9
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AAAGCTTT-
NNGCAGCTGTC

Tcf12(HLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:10
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AAAGCTTT--
NCAGCTGCTG