Information for motif39


Reverse Opposite:

p-value:1e-8
log p-value:-1.880e+01
Information Content per bp:1.647
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif3.01%
Number of Background Sequences with motif4.7
Percentage of Background Sequences with motif0.62%
Average Position of motif in Targets25.4 +/- 13.1bp
Average Position of motif in Background32.3 +/- 6.3bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0037.1_Hdx/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CTGTTTGATTCC-----
TNNNATGATTTCNNCNN

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:2
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:CTGTTTGATTCC---
-----RCATTCCWGG

MA0042.1_FOXI1/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CTGTTTGATTCC
GGATGTTTGTTT--

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:4
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:CTGTTTGATTCC---
-----GCATTCCAGN

MF0005.1_Forkhead_class/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CTGTTTGATTCC
-TGTTTATTT--

MA0041.1_Foxd3/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CTGTTTGATTCC
GAATGTTTGTTT--

CHR/Cell-Cycle-Exp/Homer

Match Rank:7
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CTGTTTGATTCC-
---TTTGAAACCG

MA0151.1_ARID3A/Jaspar

Match Rank:8
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CTGTTTGATTCC
---TTTAAT---

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CTGTTTGATTCC-
NNANTGATTGATNNNN

MA0081.1_SPIB/Jaspar

Match Rank:10
Score:0.56
Offset:8
Orientation:reverse strand
Alignment:CTGTTTGATTCC---
--------TTCCTCT