Information for motif41


Reverse Opposite:

p-value:1e-6
log p-value:-1.395e+01
Information Content per bp:1.629
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.84%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.30%
Average Position of motif in Targets22.5 +/- 11.4bp
Average Position of motif in Background22.1 +/- 6.2bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.68
Offset:3
Orientation:reverse strand
Alignment:TACTKTATTTTT---
---KCTATTTTTRGH

MA0497.1_MEF2C/Jaspar

Match Rank:2
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:TACTKTATTTTT-----
--TTCTATTTTTAGNNN

MA0052.2_MEF2A/Jaspar

Match Rank:3
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TACTKTATTTTT----
-NNGCTATTTTTAGCN

PB0182.1_Srf_2/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TACTKTATTTTT-----
NNNNTTTTTTTTTNAAC

PB0192.1_Tcfap2e_2/Jaspar

Match Rank:5
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:TACTKTATTTTT-------
-----TTTTTTTTCNNGTN

PB0074.1_Sox8_1/Jaspar

Match Rank:6
Score:0.60
Offset:0
Orientation:forward strand
Alignment:TACTKTATTTTT-----
GTATCTATTGTTCTTTA

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529/Homer

Match Rank:7
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:TACTKTATTTTT--
----CTATTTTTGG

PB0065.1_Sox15_1/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:TACTKTATTTTT-----
ANNTCTATTGTTCNNNA

MA0041.1_Foxd3/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TACTKTATTTTT
GAATGTTTGTTT

PB0116.1_Elf3_2/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TACTKTATTTTT-----
GNATTTTTTTTTTGANC