Information for motif42


Reverse Opposite:

p-value:1e-5
log p-value:-1.366e+01
Information Content per bp:1.562
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.51%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.55%
Average Position of motif in Targets23.8 +/- 11.6bp
Average Position of motif in Background32.5 +/- 16.5bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0051.1_Osr2_1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-ATCGCTACCG-----
CNNNGCTACTGTANNN

PB0050.1_Osr1_1/Jaspar

Match Rank:2
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-ATCGCTACCG-----
TNNTGCTACTGTNNNN

PB0155.1_Osr2_2/Jaspar

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-ATCGCTACCG-----
ACTTGCTACCTACACC

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--ATCGCTACCG
DGATCRATAN--

PB0154.1_Osr1_2/Jaspar

Match Rank:5
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-ATCGCTACCG-----
ACATGCTACCTAATAC

PB0159.1_Rfx4_2/Jaspar

Match Rank:6
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----ATCGCTACCG-
TACCCTAGTTACCGA

PB0036.1_Irf6_1/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---ATCGCTACCG----
CTGATCGAAACCAAAGT

MA0062.2_GABPA/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:ATCGCTACCG-
NCCACTTCCGG

MA0032.1_FOXC1/Jaspar

Match Rank:9
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:ATCGCTACCG---
-----TACTNNNN

MA0076.2_ELK4/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:ATCGCTACCG--
-CCACTTCCGGC