Information for motif6


Reverse Opposite:

p-value:1e-23
log p-value:-5.424e+01
Information Content per bp:1.699
Number of Target Sequences with motif31.0
Percentage of Target Sequences with motif5.18%
Number of Background Sequences with motif3.6
Percentage of Background Sequences with motif0.47%
Average Position of motif in Targets24.4 +/- 13.4bp
Average Position of motif in Background29.4 +/- 9.9bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

GFY(?)/Promoter/Homer

Match Rank:1
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CTCCAAATMCAT
ACTACAATTCCC-

PB0170.1_Sox17_2/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CTCCAAATMCAT-----
GACCACATTCATACAAT

POL008.1_DCE_S_I/Jaspar

Match Rank:3
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CTCCAAATMCAT
GCTTCC-------

MA0130.1_ZNF354C/Jaspar

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CTCCAAATMCAT
ATCCAC------

MA0507.1_POU2F2/Jaspar

Match Rank:5
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CTCCAAATMCAT
ATATGCAAATNNN-

Oct2(POU/Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:6
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--CTCCAAATMCAT
ATATGCAAAT----

Oct4(POU/Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--CTCCAAATMCAT
TTATGCAAAT----

ETS:RUNX/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer

Match Rank:8
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:CTCCAAATMCAT-
-ACCACATCCTGT

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.53
Offset:-5
Orientation:forward strand
Alignment:-----CTCCAAATMCAT
CNGTCCTCCC-------

POL013.1_MED-1/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-CTCCAAATMCAT
GCTCCG-------