Information for motif7


Reverse Opposite:

p-value:1e-23
log p-value:-5.365e+01
Information Content per bp:1.751
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif6.69%
Number of Background Sequences with motif6.3
Percentage of Background Sequences with motif0.83%
Average Position of motif in Targets24.4 +/- 11.5bp
Average Position of motif in Background15.7 +/- 8.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0117.1_Eomes_2/Jaspar

Match Rank:1
Score:0.60
Offset:-6
Orientation:forward strand
Alignment:------GTGTCGCAGT
GCGGAGGTGTCGCCTC

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:2
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----GTGTCGCAGT--
NTNNCGTATCCAAGTNN

PB0036.1_Irf6_1/Jaspar

Match Rank:3
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------GTGTCGCAGT-
NNNTTGGTTTCGNTNNN

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--GTGTCGCAGT
TGGTTTCAGT--

PH0164.1_Six4/Jaspar

Match Rank:5
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------GTGTCGCAGT-
TNNNNGGTGTCATNTNT

PB0034.1_Irf4_1/Jaspar

Match Rank:6
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----GTGTCGCAGT-
TNTGGTTTCGATACN

Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GTGTCGCAGT
AGGTGTCA----

PB0035.1_Irf5_1/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:reverse strand
Alignment:---GTGTCGCAGT--
NTGGTTTCGGTTNNN

MA0519.1_Stat5a::Stat5b/Jaspar

Match Rank:9
Score:0.53
Offset:0
Orientation:forward strand
Alignment:GTGTCGCAGT-
ATTTCCAAGAA

MA0067.1_Pax2/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GTGTCGCAGT
-AGTCACGC-