Information for motif12


Reverse Opposite:

p-value:1e-37
log p-value:-8.663e+01
Information Content per bp:1.846
Number of Target Sequences with motif53.0
Percentage of Target Sequences with motif7.31%
Number of Background Sequences with motif2.9
Percentage of Background Sequences with motif0.89%
Average Position of motif in Targets23.3 +/- 13.8bp
Average Position of motif in Background21.5 +/- 6.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0180.1_Sp4_2/Jaspar

Match Rank:1
Score:0.77
Offset:-4
Orientation:forward strand
Alignment:----GGCATGGC---
CAAAGGCGTGGCCAG

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:2
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--GGCATGGC
DGGGYGKGGC

PB0147.1_Max_2/Jaspar

Match Rank:3
Score:0.68
Offset:-4
Orientation:reverse strand
Alignment:----GGCATGGC--
NNGTCGCGTGNCAC

MA0067.1_Pax2/Jaspar

Match Rank:4
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:GGCATGGC-
-NCGTGACN

MA0039.2_Klf4/Jaspar

Match Rank:5
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--GGCATGGC
TGGGTGGGGC

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:6
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GGCATGGC
TGCGTG--

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--GGCATGGC
TGGGTGTGGC

MA0089.1_NFE2L1::MafG/Jaspar

Match Rank:8
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GGCATGGC
--CATGAC

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo et al.)/Homer

Match Rank:9
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GGCATGGC-
TTGCGTGCVA

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:10
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GGCATGGC
CCWGGAATGY-