Information for motif19


Reverse Opposite:

p-value:1e-20
log p-value:-4.660e+01
Information Content per bp:1.578
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif4.97%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.92%
Average Position of motif in Targets26.2 +/- 8.9bp
Average Position of motif in Background31.5 +/- 5.8bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0162.2_EGR1/Jaspar

Match Rank:1
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CCWCCWCTCTCTCMCTGCCT
CCCCCGCCCCCGCC------

MA0528.1_ZNF263/Jaspar

Match Rank:2
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CCWCCWCTCTCTCMCTGCCT-
TCCTCCTCCCCCTCCTCCTCC

PB0097.1_Zfp281_1/Jaspar

Match Rank:3
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-CCWCCWCTCTCTCMCTGCCT
TCCCCCCCCCCCCCC------

MA0472.1_EGR2/Jaspar

Match Rank:4
Score:0.51
Offset:0
Orientation:forward strand
Alignment:CCWCCWCTCTCTCMCTGCCT
CCCCCGCCCACGCAC-----

PB0010.1_Egr1_1/Jaspar

Match Rank:5
Score:0.51
Offset:2
Orientation:forward strand
Alignment:CCWCCWCTCTCTCMCTGCCT
--TCCGCCCCCGCATT----

MA0149.1_EWSR1-FLI1/Jaspar

Match Rank:6
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:CCWCCWCTCTCTCMCTGCCT
CCTTCCTTCCTTCCTTCC--

PB0164.1_Smad3_2/Jaspar

Match Rank:7
Score:0.50
Offset:-6
Orientation:forward strand
Alignment:------CCWCCWCTCTCTCMCTGCCT
TACGCCCCGCCACTCTG---------

PB0137.1_Irf3_2/Jaspar

Match Rank:8
Score:0.50
Offset:-2
Orientation:reverse strand
Alignment:--CCWCCWCTCTCTCMCTGCCT
NNGCACCTTTCTCC--------

MA0516.1_SP2/Jaspar

Match Rank:9
Score:0.50
Offset:-3
Orientation:forward strand
Alignment:---CCWCCWCTCTCTCMCTGCCT
GCCCCGCCCCCTCCC--------

MA0508.1_PRDM1/Jaspar

Match Rank:10
Score:0.49
Offset:5
Orientation:reverse strand
Alignment:CCWCCWCTCTCTCMCTGCCT
-----TCACTTTCACTTTCN