Information for motif2


Reverse Opposite:

p-value:1e-89
log p-value:-2.050e+02
Information Content per bp:1.631
Number of Target Sequences with motif94.0
Percentage of Target Sequences with motif12.97%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.69%
Average Position of motif in Targets25.9 +/- 12.3bp
Average Position of motif in Background8.2 +/- 0.3bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.83
Offset:-3
Orientation:reverse strand
Alignment:---GGCGGRGC-
GGGGGCGGGGCC

POL003.1_GC-box/Jaspar

Match Rank:2
Score:0.81
Offset:-4
Orientation:forward strand
Alignment:----GGCGGRGC--
AGGGGGCGGGGCTG

MA0079.3_SP1/Jaspar

Match Rank:3
Score:0.80
Offset:-3
Orientation:reverse strand
Alignment:---GGCGGRGC
GGGGGCGGGGC

PB0164.1_Smad3_2/Jaspar

Match Rank:4
Score:0.79
Offset:-6
Orientation:reverse strand
Alignment:------GGCGGRGC---
NAGANTGGCGGGGNGNA

MA0516.1_SP2/Jaspar

Match Rank:5
Score:0.77
Offset:-7
Orientation:reverse strand
Alignment:-------GGCGGRGC
GGGNGGGGGCGGGGC

MA0599.1_KLF5/Jaspar

Match Rank:6
Score:0.77
Offset:-2
Orientation:reverse strand
Alignment:--GGCGGRGC
GGGGNGGGGC

POL013.1_MED-1/Jaspar

Match Rank:7
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:GGCGGRGC
--CGGAGC

MA0039.2_Klf4/Jaspar

Match Rank:8
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--GGCGGRGC
TGGGTGGGGC

PB0039.1_Klf7_1/Jaspar

Match Rank:9
Score:0.72
Offset:-5
Orientation:reverse strand
Alignment:-----GGCGGRGC---
NNAGGGGCGGGGTNNA

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:10
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GGCGGRGC
DGGGYGKGGC