Information for motif22


Reverse Opposite:

p-value:1e-17
log p-value:-4.125e+01
Information Content per bp:1.542
Number of Target Sequences with motif40.0
Percentage of Target Sequences with motif5.52%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.99%
Average Position of motif in Targets26.9 +/- 12.5bp
Average Position of motif in Background31.7 +/- 6.9bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0122.1_Nkx3-2/Jaspar

Match Rank:1
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:YMTCACTC--
-NCCACTTAN

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:2
Score:0.68
Offset:1
Orientation:forward strand
Alignment:YMTCACTC---
-RSCACTYRAG

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:3
Score:0.68
Offset:0
Orientation:forward strand
Alignment:YMTCACTC--
AASCACTCAA

MA0595.1_SREBF1/Jaspar

Match Rank:4
Score:0.67
Offset:1
Orientation:forward strand
Alignment:YMTCACTC---
-ATCACCCCAC

Srebp1a(HLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.66
Offset:1
Orientation:forward strand
Alignment:YMTCACTC---
-ATCACCCCAT

MA0070.1_PBX1/Jaspar

Match Rank:6
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-YMTCACTC---
CCATCAATCAAA

POL002.1_INR/Jaspar

Match Rank:7
Score:0.65
Offset:2
Orientation:forward strand
Alignment:YMTCACTC--
--TCAGTCTT

MA0503.1_Nkx2-5_(var.2)/Jaspar

Match Rank:8
Score:0.64
Offset:0
Orientation:forward strand
Alignment:YMTCACTC---
AGCCACTCAAG

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.64
Offset:1
Orientation:forward strand
Alignment:YMTCACTC---
-ATGACTCATC

MA0099.2_JUN::FOS/Jaspar

Match Rank:10
Score:0.64
Offset:2
Orientation:forward strand
Alignment:YMTCACTC-
--TGACTCA