Information for motif23


Reverse Opposite:

p-value:1e-17
log p-value:-4.022e+01
Information Content per bp:1.718
Number of Target Sequences with motif25.0
Percentage of Target Sequences with motif3.45%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.42%
Average Position of motif in Targets26.7 +/- 13.6bp
Average Position of motif in Background20.3 +/- 6.2bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0498.1_Meis1/Jaspar

Match Rank:1
Score:0.80
Offset:1
Orientation:forward strand
Alignment:AWGCTGTCAG------
-AGCTGTCACTCACCT

PH0169.1_Tgif1/Jaspar

Match Rank:2
Score:0.75
Offset:-3
Orientation:reverse strand
Alignment:---AWGCTGTCAG----
NNNCAGCTGTCAATATN

PH0170.1_Tgif2/Jaspar

Match Rank:3
Score:0.71
Offset:-3
Orientation:forward strand
Alignment:---AWGCTGTCAG---
AACTAGCTGTCAATAC

PH0102.1_Meis1/Jaspar

Match Rank:4
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---AWGCTGTCAG---
AACGAGCTGTCAATAC

PH0105.1_Meis3/Jaspar

Match Rank:5
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---AWGCTGTCAG---
AATTACCTGTCAATAC

POL009.1_DCE_S_II/Jaspar

Match Rank:6
Score:0.67
Offset:2
Orientation:forward strand
Alignment:AWGCTGTCAG
--GCTGTG--

PH0104.1_Meis2/Jaspar

Match Rank:7
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---AWGCTGTCAG---
AAAGACCTGTCAATAC

PH0141.1_Pknox2/Jaspar

Match Rank:8
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AWGCTGTCAG---
AAGCACCTGTCAATAT

MA0488.1_JUN/Jaspar

Match Rank:9
Score:0.65
Offset:-3
Orientation:forward strand
Alignment:---AWGCTGTCAG
AAGATGATGTCAT

MA0100.2_Myb/Jaspar

Match Rank:10
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-AWGCTGTCAG
CCAACTGCCA-