Information for motif26


Reverse Opposite:

p-value:1e-10
log p-value:-2.408e+01
Information Content per bp:1.578
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.48%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.55%
Average Position of motif in Targets22.7 +/- 11.3bp
Average Position of motif in Background32.7 +/- 5.0bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:1
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--TKCCTCAGGAAG-
NTNGCCTCAGGCNNN

MA0524.1_TFAP2C/Jaspar

Match Rank:2
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---TKCCTCAGGAAG
CATGGCCCCAGGGCA

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:3
Score:0.71
Offset:1
Orientation:forward strand
Alignment:TKCCTCAGGAAG-
-SCCTSAGGSCAW

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:4
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--TKCCTCAGGAAG-
NTCGCCTCAGGCAAT

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:TKCCTCAGGAAG-
-GCCTCAGGGCAT

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:6
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TKCCTCAGGAAG-
NTCCCCTCAGGGANT

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:7
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--TKCCTCAGGAAG-
ATTGCCTCAGGCAAT

MA0003.2_TFAP2A/Jaspar

Match Rank:8
Score:0.69
Offset:-3
Orientation:forward strand
Alignment:---TKCCTCAGGAAG
CATTGCCTCAGGGCA

MA0598.1_EHF/Jaspar

Match Rank:9
Score:0.68
Offset:5
Orientation:reverse strand
Alignment:TKCCTCAGGAAG-
-----CAGGAAGG

STAT6/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:10
Score:0.67
Offset:0
Orientation:forward strand
Alignment:TKCCTCAGGAAG
TTCCKNAGAA--