Information for motif5


Reverse Opposite:

p-value:1e-54
log p-value:-1.246e+02
Information Content per bp:1.820
Number of Target Sequences with motif54.0
Percentage of Target Sequences with motif7.45%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets22.2 +/- 12.4bp
Average Position of motif in Background30.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL010.1_DCE_S_III/Jaspar

Match Rank:1
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:CCGAGGCT-
----NGCTN

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:2
Score:0.66
Offset:-5
Orientation:forward strand
Alignment:-----CCGAGGCT--
ATTGCCTGAGGCAAT

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:3
Score:0.64
Offset:-5
Orientation:reverse strand
Alignment:-----CCGAGGCT--
ANTGCCTGAGGCAAN

MA0003.2_TFAP2A/Jaspar

Match Rank:4
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CCGAGGCT---
TGCCCTGAGGCANTN

AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer

Match Rank:5
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----CCGAGGCT
WTGSCCTSAGGS-

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CCGAGGCT
ATGCCCTGAGGC-

PB0087.1_Tcfap2c_1/Jaspar

Match Rank:7
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CCGAGGCT--
ATTGCCTGAGGCGAA

MA0146.2_Zfx/Jaspar

Match Rank:8
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CCGAGGCT--
GGGGCCGAGGCCTG

MA0524.1_TFAP2C/Jaspar

Match Rank:9
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CCGAGGCT---
TGCCCTGGGGCNANN

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:10
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CCGAGGCT--
--TWGTCTGV