Information for motif7


Reverse Opposite:

p-value:1e-48
log p-value:-1.117e+02
Information Content per bp:1.617
Number of Target Sequences with motif50.0
Percentage of Target Sequences with motif6.90%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.52%
Average Position of motif in Targets19.7 +/- 11.3bp
Average Position of motif in Background36.2 +/- 4.1bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0130.1_Gm397_2/Jaspar

Match Rank:1
Score:0.81
Offset:-5
Orientation:reverse strand
Alignment:-----TGTGTGCG---
NNGCGTGTGTGCNGCN

PB0208.1_Zscan4_2/Jaspar

Match Rank:2
Score:0.79
Offset:-5
Orientation:reverse strand
Alignment:-----TGTGTGCG---
NNNNTTGTGTGCTTNN

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.74
Offset:0
Orientation:forward strand
Alignment:TGTGTGCG--
TGCGTGGGYG

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo et al.)/Homer

Match Rank:4
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TGTGTGCG-
TTGCGTGCVA

MA0472.1_EGR2/Jaspar

Match Rank:5
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TGTGTGCG------
GTGCGTGGGCGGGNG

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:6
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TGTGTGCG
TGCGTG--

Egr2/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:7
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TGTGTGCG--
NGCGTGGGCGGR

PB0168.1_Sox14_2/Jaspar

Match Rank:8
Score:0.66
Offset:-7
Orientation:reverse strand
Alignment:-------TGTGTGCG
NNNCCATTGTGTNAN

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:TGTGTGCG--
TGGGTGTGGC

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:10
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-TGTGTGCG---
NTGGGTGTGGCC