Information for motif9


Reverse Opposite:

p-value:1e-43
log p-value:-9.914e+01
Information Content per bp:1.477
Number of Target Sequences with motif46.0
Percentage of Target Sequences with motif6.34%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.50%
Average Position of motif in Targets23.7 +/- 12.6bp
Average Position of motif in Background19.7 +/- 6.4bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.75
Offset:1
Orientation:forward strand
Alignment:CVCTCCMG
-GCTCCG-

PB0091.1_Zbtb3_1/Jaspar

Match Rank:2
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----CVCTCCMG----
AATCGCACTGCATTCCG

MA0469.1_E2F3/Jaspar

Match Rank:3
Score:0.65
Offset:2
Orientation:forward strand
Alignment:CVCTCCMG---------
--CTCCCGCCCCCACTC

POL008.1_DCE_S_I/Jaspar

Match Rank:4
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CVCTCCMG
-GCTTCC-

MA0503.1_Nkx2-5_(var.2)/Jaspar

Match Rank:5
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CVCTCCMG
AGCCACTCAAG

MA0471.1_E2F6/Jaspar

Match Rank:6
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CVCTCCMG---
NCTTCCCGCCC

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:CVCTCCMG--
NYTTCCCGCC

MA0470.1_E2F4/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CVCTCCMG---
NNTTCCCGCCC

PB0203.1_Zfp691_2/Jaspar

Match Rank:9
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CVCTCCMG----
TACGAGACTCCTCTAAC

MA0062.2_GABPA/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CVCTCCMG-
NCCACTTCCGG