Information for motif3


Reverse Opposite:

p-value:1e-16
log p-value:-3.890e+01
Information Content per bp:1.469
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif27.87%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif1.41%
Average Position of motif in Targets27.1 +/- 10.3bp
Average Position of motif in Background23.7 +/- 6.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0597.1_THAP1/Jaspar

Match Rank:1
Score:0.62
Offset:9
Orientation:forward strand
Alignment:CCGGTASWGYDGCCYGCABW
---------CTGCCCGCA--

PB0024.1_Gcm1_1/Jaspar

Match Rank:2
Score:0.54
Offset:7
Orientation:forward strand
Alignment:CCGGTASWGYDGCCYGCABW---
-------TCGTACCCGCATCATT

MA0146.2_Zfx/Jaspar

Match Rank:3
Score:0.46
Offset:2
Orientation:forward strand
Alignment:CCGGTASWGYDGCCYGCABW
--GGGGCCGAGGCCTG----

MA0469.1_E2F3/Jaspar

Match Rank:4
Score:0.45
Offset:4
Orientation:reverse strand
Alignment:CCGGTASWGYDGCCYGCABW
----NNGTGNGGGCGGGAG-

PB0133.1_Hic1_2/Jaspar

Match Rank:5
Score:0.45
Offset:5
Orientation:forward strand
Alignment:CCGGTASWGYDGCCYGCABW-
-----GGGTGTGCCCAAAAGG

PB0052.1_Plagl1_1/Jaspar

Match Rank:6
Score:0.44
Offset:3
Orientation:reverse strand
Alignment:CCGGTASWGYDGCCYGCABW
---NNNGGGGCGCCCCCNN-

PB0117.1_Eomes_2/Jaspar

Match Rank:7
Score:0.44
Offset:0
Orientation:forward strand
Alignment:CCGGTASWGYDGCCYGCABW
GCGGAGGTGTCGCCTC----

PB0201.1_Zfp281_2/Jaspar

Match Rank:8
Score:0.44
Offset:6
Orientation:forward strand
Alignment:CCGGTASWGYDGCCYGCABW---
------AGGAGACCCCCAATTTG

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.43
Offset:9
Orientation:forward strand
Alignment:CCGGTASWGYDGCCYGCABW
---------CTTCCNGGAA-

PB0156.1_Plagl1_2/Jaspar

Match Rank:10
Score:0.43
Offset:3
Orientation:reverse strand
Alignment:CCGGTASWGYDGCCYGCABW
---NNNNGGTACCCCCCANN