Information for motif7


Reverse Opposite:

p-value:1e-8
log p-value:-1.930e+01
Information Content per bp:1.607
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif26.23%
Number of Background Sequences with motif3.7
Percentage of Background Sequences with motif5.27%
Average Position of motif in Targets26.2 +/- 13.2bp
Average Position of motif in Background29.2 +/- 5.5bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.27
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

NPAS2(HLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer

Match Rank:1
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:ATCAAWTGGA
GTCACGTGGM

PB0040.1_Lef1_1/Jaspar

Match Rank:2
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----ATCAAWTGGA--
NANAGATCAAAGGGNNN

MA0058.2_MAX/Jaspar

Match Rank:3
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-ATCAAWTGGA
AAGCACATGG-

PB0083.1_Tcf7_1/Jaspar

Match Rank:4
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----ATCAAWTGGA--
TATAGATCAAAGGAAAA

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:5
Score:0.62
Offset:-5
Orientation:reverse strand
Alignment:-----ATCAAWTGGA--
NNNAGATCAAAGGANNN

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--ATCAAWTGGA
ACATCAAAGGNA

MA0147.2_Myc/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-ATCAAWTGGA
AAGCACATGG-

PB0082.1_Tcf3_1/Jaspar

Match Rank:8
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----ATCAAWTGGA--
TATAGATCAAAGGAAAA

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:ATCAAWTGGA
AACAKATGGY

Usf2(HLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:10
Score:0.61
Offset:0
Orientation:forward strand
Alignment:ATCAAWTGGA
GTCACGTGGT