Information for motif18


Reverse Opposite:

p-value:1e-28
log p-value:-6.677e+01
Information Content per bp:1.601
Number of Target Sequences with motif22.0
Percentage of Target Sequences with motif4.04%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets23.6 +/- 10.1bp
Average Position of motif in Background37.4 +/- 4.7bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:GCGGAGCAGM
-CGGAGC---

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:GCGGAGCAGM-
-GGGAGGACNG

POL008.1_DCE_S_I/Jaspar

Match Rank:3
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:GCGGAGCAGM
-NGAAGC---

POL010.1_DCE_S_III/Jaspar

Match Rank:4
Score:0.64
Offset:3
Orientation:forward strand
Alignment:GCGGAGCAGM
---CAGCC--

MA0599.1_KLF5/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GCGGAGCAGM
GGGGNGGGGC

MA0079.3_SP1/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-GCGGAGCAGM
GGGGGCGGGGC

MA0048.1_NHLH1/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCGGAGCAGM--
GCGCAGCTGCGT

POL003.1_GC-box/Jaspar

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GCGGAGCAGM--
AGGGGGCGGGGCTG

MA0039.2_Klf4/Jaspar

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GCGGAGCAGM
TGGGTGGGGC

Sp1(Zf)/Promoter/Homer

Match Rank:10
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCGGAGCAGM-
GGGGGCGGGGCC