Information for motif25


Reverse Opposite:

p-value:1e-17
log p-value:-4.041e+01
Information Content per bp:1.899
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif2.75%
Number of Background Sequences with motif1.5
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets30.1 +/- 15.9bp
Average Position of motif in Background25.6 +/- 7.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0470.1_E2F4/Jaspar

Match Rank:1
Score:0.75
Offset:0
Orientation:forward strand
Alignment:GTGCGGGAAG-
GGGCGGGAAGG

MA0471.1_E2F6/Jaspar

Match Rank:2
Score:0.74
Offset:0
Orientation:forward strand
Alignment:GTGCGGGAAG-
GGGCGGGAAGG

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.72
Offset:1
Orientation:forward strand
Alignment:GTGCGGGAAG-
-GGCGGGAARN

MA0024.2_E2F1/Jaspar

Match Rank:4
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GTGCGGGAAG
CGGGCGGGAGG

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:5
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GTGCGGGAAG
CWGGCGGGAA-

MA0597.1_THAP1/Jaspar

Match Rank:6
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:GTGCGGGAAG
-TNNGGGCAG

MA0076.2_ELK4/Jaspar

Match Rank:7
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:GTGCGGGAAG---
--NCCGGAAGTGG

MA0469.1_E2F3/Jaspar

Match Rank:8
Score:0.68
Offset:-6
Orientation:reverse strand
Alignment:------GTGCGGGAAG
NNGTGNGGGCGGGAG-

MA0475.1_FLI1/Jaspar

Match Rank:9
Score:0.67
Offset:2
Orientation:forward strand
Alignment:GTGCGGGAAG---
--ACAGGAAGTGG

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:10
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GTGCGGGAAG--
TGGCGGGAAAHB