Information for motif10


Reverse Opposite:

p-value:1e-57
log p-value:-1.327e+02
Information Content per bp:1.679
Number of Target Sequences with motif117.0
Percentage of Target Sequences with motif16.98%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif3.08%
Average Position of motif in Targets25.5 +/- 12.8bp
Average Position of motif in Background30.2 +/- 9.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0057.1_Rxra_1/Jaspar

Match Rank:1
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----GGGGCCACTG--
NTNNNGGGGTCANGNNN

PB0153.1_Nr2f2_2/Jaspar

Match Rank:2
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----GGGGCCACTG-
CGCGCCGGGTCACGTA

PB0118.1_Esrra_2/Jaspar

Match Rank:3
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----GGGGCCACTG--
GGCGAGGGGTCAAGGGC

MA0130.1_ZNF354C/Jaspar

Match Rank:4
Score:0.61
Offset:2
Orientation:forward strand
Alignment:GGGGCCACTG
--ATCCAC--

MA0161.1_NFIC/Jaspar

Match Rank:5
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GGGGCCACTG
--TGCCAA--

PB0113.1_E2F3_2/Jaspar

Match Rank:6
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----GGGGCCACTG--
AGCTCGGCGCCAAAAGC

ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:7
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-GGGGCCACTG
CTAGGCCT---

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GGGGCCACTG----
CATAAGACCACCATTAC

FXR(NR/IR1)/Liver-FXR-ChIP-Seq(Chong et al.)/Homer

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GGGGCCACTG----
NAGGTCANTGACCT

PB0051.1_Osr2_1/Jaspar

Match Rank:10
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GGGGCCACTG-----
CNNNGCTACTGTANNN