Information for motif12


Reverse Opposite:

p-value:1e-44
log p-value:-1.034e+02
Information Content per bp:1.887
Number of Target Sequences with motif59.0
Percentage of Target Sequences with motif8.56%
Number of Background Sequences with motif0.9
Percentage of Background Sequences with motif0.58%
Average Position of motif in Targets27.5 +/- 8.8bp
Average Position of motif in Background21.8 +/- 4.2bp
Strand Bias (log2 ratio + to - strand density)1.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0051.1_IRF2/Jaspar

Match Rank:1
Score:0.48
Offset:2
Orientation:reverse strand
Alignment:GCACGGTGCCTTCGCTCTCC
--GTTTTGCTTTCACTTTCC

MA0119.1_TLX1::NFIC/Jaspar

Match Rank:2
Score:0.46
Offset:-3
Orientation:reverse strand
Alignment:---GCACGGTGCCTTCGCTCTCC
TTGGCATGGTGCCA---------

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:3
Score:0.46
Offset:6
Orientation:reverse strand
Alignment:GCACGGTGCCTTCGCTCTCC
------TNCCTTTGATGT--

MA0112.2_ESR1/Jaspar

Match Rank:4
Score:0.45
Offset:-3
Orientation:reverse strand
Alignment:---GCACGGTGCCTTCGCTCTCC
AGGTCAGGGTGACCTGGNNN---

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:5
Score:0.44
Offset:3
Orientation:forward strand
Alignment:GCACGGTGCCTTCGCTCTCC
---CTGCGCATGCGC-----

MA0506.1_NRF1/Jaspar

Match Rank:6
Score:0.44
Offset:5
Orientation:forward strand
Alignment:GCACGGTGCCTTCGCTCTCC
-----GCGCCTGCGCA----

PRDM1/BMI1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.43
Offset:7
Orientation:forward strand
Alignment:GCACGGTGCCTTCGCTCTCC
-------ACTTTCACTTTC-

MA0523.1_TCF7L2/Jaspar

Match Rank:8
Score:0.43
Offset:6
Orientation:reverse strand
Alignment:GCACGGTGCCTTCGCTCTCC
------TNCCTTTGATCTTN

PB0040.1_Lef1_1/Jaspar

Match Rank:9
Score:0.43
Offset:4
Orientation:forward strand
Alignment:GCACGGTGCCTTCGCTCTCC-
----AATCCCTTTGATCTATC

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:10
Score:0.43
Offset:7
Orientation:reverse strand
Alignment:GCACGGTGCCTTCGCTCTCC
-------RSTTTCRSTTTC-