Information for motif13


Reverse Opposite:

p-value:1e-40
log p-value:-9.285e+01
Information Content per bp:1.612
Number of Target Sequences with motif55.0
Percentage of Target Sequences with motif7.98%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.73%
Average Position of motif in Targets25.7 +/- 13.1bp
Average Position of motif in Background20.9 +/- 6.0bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL013.1_MED-1/Jaspar

Match Rank:1
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:TCGGAGCTCT
-CGGAGC---

PB0099.1_Zfp691_1/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--TCGGAGCTCT-----
NNNNTGAGCACTGTNNG

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.62
Offset:3
Orientation:forward strand
Alignment:TCGGAGCTCT
---CAGCC--

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TCGGAGCTCT-
-GGGAGGACNG

MA0512.1_Rxra/Jaspar

Match Rank:5
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TCGGAGCTCT-
NCTGACCTTTG

PB0115.1_Ehf_2/Jaspar

Match Rank:6
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----TCGGAGCTCT--
AAGATCGGAANTNNNA

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.53
Offset:3
Orientation:forward strand
Alignment:TCGGAGCTCT---
---AASCACTCAA

POL008.1_DCE_S_I/Jaspar

Match Rank:8
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:TCGGAGCTCT
-NGAAGC---

MA0048.1_NHLH1/Jaspar

Match Rank:9
Score:0.51
Offset:0
Orientation:forward strand
Alignment:TCGGAGCTCT--
GCGCAGCTGCGT

PB0052.1_Plagl1_1/Jaspar

Match Rank:10
Score:0.49
Offset:-1
Orientation:reverse strand
Alignment:-TCGGAGCTCT-----
NNNGGGGCGCCCCCNN