Information for motif15


Reverse Opposite:

p-value:1e-36
log p-value:-8.339e+01
Information Content per bp:1.845
Number of Target Sequences with motif80.0
Percentage of Target Sequences with motif11.61%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif2.02%
Average Position of motif in Targets19.6 +/- 11.4bp
Average Position of motif in Background12.4 +/- 9.6bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CACSCACCKC
CACGCA----

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo et al.)/Homer

Match Rank:2
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---CACSCACCKC
TBGCACGCAA---

GLI3(Zf)/GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:3
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CACSCACCKC
GGACCACCCACG--

SD0001.1_at_AC_acceptor/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-CACSCACCKC
NNACTTACCTN

Egr2/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CACSCACCKC
YCCGCCCACGCN

PB0130.1_Gm397_2/Jaspar

Match Rank:6
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----CACSCACCKC-
AGCGGCACACACGCAA

MA0472.1_EGR2/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CACSCACCKC-
CCCCCGCCCACGCAC

MA0103.2_ZEB1/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CACSCACCKC
-CCTCACCTG

MA0493.1_Klf1/Jaspar

Match Rank:9
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----CACSCACCKC
GGCCACACCCA----

MA0259.1_HIF1A::ARNT/Jaspar

Match Rank:10
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CACSCACCKC
GCACGTNC---