Information for motif17


Reverse Opposite:

p-value:1e-25
log p-value:-5.874e+01
Information Content per bp:1.630
Number of Target Sequences with motif55.0
Percentage of Target Sequences with motif7.98%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif1.77%
Average Position of motif in Targets27.0 +/- 13.0bp
Average Position of motif in Background20.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF711(Zf)/SH-SY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:1
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CCATGCCGCA
CTAGGCCT--

PB0039.1_Klf7_1/Jaspar

Match Rank:2
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CCATGCCGCA--
TCGACCCCGCCCCTAT

POL006.1_BREu/Jaspar

Match Rank:3
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CCATGCCGCA
AGCGCGCC---

PB0147.1_Max_2/Jaspar

Match Rank:4
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CCATGCCGCA-
GTGCCACGCGACTG

MA0146.2_Zfx/Jaspar

Match Rank:5
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CCATGCCGCA-----
-CAGGCCNNGGCCNN

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CCATGCCGCA
CNAGGCCT--

MA0006.1_Arnt::Ahr/Jaspar

Match Rank:7
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:CCATGCCGCA
-CACGCA---

Sp1(Zf)/Promoter/Homer

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--CCATGCCGCA
GGCCCCGCCCCC

POL003.1_GC-box/Jaspar

Match Rank:9
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---CCATGCCGCA-
NAGCCCCGCCCCCN

MA0039.2_Klf4/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CCATGCCGCA
GCCCCACCCA-