Information for motif19


Reverse Opposite:

p-value:1e-19
log p-value:-4.587e+01
Information Content per bp:1.487
Number of Target Sequences with motif48.0
Percentage of Target Sequences with motif6.97%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif1.38%
Average Position of motif in Targets22.3 +/- 13.0bp
Average Position of motif in Background32.3 +/- 12.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0114.1_Egr1_2/Jaspar

Match Rank:1
Score:0.72
Offset:-5
Orientation:reverse strand
Alignment:-----CCCACTCTGG-
NNAGTCCCACTCNNNN

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CCCACTCTGG
CRCCCACGCA--

Egr2/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:3
Score:0.64
Offset:-4
Orientation:reverse strand
Alignment:----CCCACTCTGG
YCCGCCCACGCN--

MA0472.1_EGR2/Jaspar

Match Rank:4
Score:0.62
Offset:-6
Orientation:forward strand
Alignment:------CCCACTCTGG
CCCCCGCCCACGCAC-

PB0107.1_Ascl2_2/Jaspar

Match Rank:5
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----CCCACTCTGG-
CTATCCCCGCCCTATT

MA0599.1_KLF5/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCCACTCTGG
GCCCCGCCCC--

PB0101.1_Zic1_1/Jaspar

Match Rank:7
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CCCACTCTGG----
CCCCCCCGGGGGNN

MA0503.1_Nkx2-5_(var.2)/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CCCACTCTGG
AGCCACTCAAG

MA0092.1_Hand1::Tcfe2a/Jaspar

Match Rank:9
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CCCACTCTGG---
---GGTCTGGCAT

MA0039.2_Klf4/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CCCACTCTGG
GCCCCACCCA--