Information for motif2


Reverse Opposite:

p-value:1e-161
log p-value:-3.722e+02
Information Content per bp:1.530
Number of Target Sequences with motif172.0
Percentage of Target Sequences with motif24.96%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif1.71%
Average Position of motif in Targets25.3 +/- 11.8bp
Average Position of motif in Background38.6 +/- 4.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.21
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0469.1_E2F3/Jaspar

Match Rank:1
Score:0.81
Offset:-1
Orientation:forward strand
Alignment:-TCCCGCCGCC----
CTCCCGCCCCCACTC

MA0470.1_E2F4/Jaspar

Match Rank:2
Score:0.77
Offset:-3
Orientation:reverse strand
Alignment:---TCCCGCCGCC
NNTTCCCGCCC--

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.76
Offset:-3
Orientation:reverse strand
Alignment:---TCCCGCCGCC
NYTTCCCGCC---

MA0516.1_SP2/Jaspar

Match Rank:4
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-TCCCGCCGCC----
GCCCCGCCCCCTCCC

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:5
Score:0.75
Offset:-1
Orientation:reverse strand
Alignment:-TCCCGCCGCC
TTCCCGCCWG-

MA0471.1_E2F6/Jaspar

Match Rank:6
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---TCCCGCCGCC
NCTTCCCGCCC--

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.73
Offset:-3
Orientation:reverse strand
Alignment:---TCCCGCCGCC
DTTTCCCGCC---

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:8
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----TCCCGCCGCC
VDTTTCCCGCCA--

PB0076.1_Sp4_1/Jaspar

Match Rank:9
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--TCCCGCCGCC-----
GGTCCCGCCCCCTTCTC

MA0079.3_SP1/Jaspar

Match Rank:10
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-TCCCGCCGCC
GCCCCGCCCCC