Information for motif4


Reverse Opposite:

p-value:1e-123
log p-value:-2.838e+02
Information Content per bp:1.580
Number of Target Sequences with motif117.0
Percentage of Target Sequences with motif16.98%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif1.07%
Average Position of motif in Targets23.8 +/- 12.4bp
Average Position of motif in Background26.7 +/- 10.3bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0103.1_Zic3_1/Jaspar

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GCBTCCSGGG----
NCCCCCCCGGGGGGN

PB0102.1_Zic2_1/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GCBTCCSGGG----
ACCCCCCCGGGGGGN

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GCBTCCSGGG-
-CTTCCNGGAA

PB0101.1_Zic1_1/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:GCBTCCSGGG----
CCCCCCCGGGGGNN

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:5
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GCBTCCSGGG----
RGSMTBCTGGGAAAT

PB0204.1_Zfp740_2/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:GCBTCCSGGG-------
ANTNCCGGGGGGAANTT

MA0062.2_GABPA/Jaspar

Match Rank:7
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---GCBTCCSGGG
NCCACTTCCGG--

MA0076.2_ELK4/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--GCBTCCSGGG
CCACTTCCGGC-

MA0028.1_ELK1/Jaspar

Match Rank:9
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GCBTCCSGGG--
--CTTCCGGNNN

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GCBTCCSGGG--
ATTCCCTGAGGGGAA