Information for motif6


Reverse Opposite:

p-value:1e-95
log p-value:-2.200e+02
Information Content per bp:1.366
Number of Target Sequences with motif98.0
Percentage of Target Sequences with motif14.22%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.51%
Average Position of motif in Targets24.9 +/- 9.5bp
Average Position of motif in Background21.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.52
Offset:1
Orientation:forward strand
Alignment:GSSCBSCGSCNBGSBGSSCV
-GGCCCCGCCCCC-------

PB0101.1_Zic1_1/Jaspar

Match Rank:2
Score:0.49
Offset:3
Orientation:forward strand
Alignment:GSSCBSCGSCNBGSBGSSCV
---CACCCCCGGGGGGG---

PB0103.1_Zic3_1/Jaspar

Match Rank:3
Score:0.48
Offset:3
Orientation:forward strand
Alignment:GSSCBSCGSCNBGSBGSSCV
---CCCCCCCGGGGGGGT--

PB0052.1_Plagl1_1/Jaspar

Match Rank:4
Score:0.48
Offset:-4
Orientation:reverse strand
Alignment:----GSSCBSCGSCNBGSBGSSCV
NNNGGGGCGCCCCCNN--------

PB0102.1_Zic2_1/Jaspar

Match Rank:5
Score:0.47
Offset:3
Orientation:forward strand
Alignment:GSSCBSCGSCNBGSBGSSCV
---CCCCCCCGGGGGGGT--

MA0516.1_SP2/Jaspar

Match Rank:6
Score:0.47
Offset:2
Orientation:forward strand
Alignment:GSSCBSCGSCNBGSBGSSCV
--GCCCCGCCCCCTCCC---

MA0146.2_Zfx/Jaspar

Match Rank:7
Score:0.46
Offset:-1
Orientation:forward strand
Alignment:-GSSCBSCGSCNBGSBGSSCV
GGGGCCGAGGCCTG-------

POL006.1_BREu/Jaspar

Match Rank:8
Score:0.46
Offset:2
Orientation:forward strand
Alignment:GSSCBSCGSCNBGSBGSSCV
--AGCGCGCC----------

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.45
Offset:-2
Orientation:forward strand
Alignment:--GSSCBSCGSCNBGSBGSSCV
ATGCCCTGAGGC----------

PB0164.1_Smad3_2/Jaspar

Match Rank:10
Score:0.45
Offset:-1
Orientation:forward strand
Alignment:-GSSCBSCGSCNBGSBGSSCV
TACGCCCCGCCACTCTG----