Information for motif8


Reverse Opposite:

p-value:1e-66
log p-value:-1.533e+02
Information Content per bp:1.530
Number of Target Sequences with motif113.0
Percentage of Target Sequences with motif16.40%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif2.15%
Average Position of motif in Targets24.3 +/- 13.8bp
Average Position of motif in Background27.9 +/- 0.2bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0028.1_ELK1/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--TCCGGCGGAG
CTTCCGGNNN--

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TCCGGCGGAG
NRYTTCCGGY----

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----TCCGGCGGAG
HACTTCCGGY----

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:TCCGGCGGAG-
-----CGGAGC

Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer

Match Rank:5
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----TCCGGCGGAG
NRYTTCCGGH----

MA0076.2_ELK4/Jaspar

Match Rank:6
Score:0.59
Offset:-5
Orientation:forward strand
Alignment:-----TCCGGCGGAG
CCACTTCCGGC----

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TCCGGCGGAG
NYTTCCCGCC---

Unknown-ESC-element/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TCCGGCGGAG
CCCCCTGCTGTG

PB0164.1_Smad3_2/Jaspar

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---TCCGGCGGAG----
NAGANTGGCGGGGNGNA

PB0205.1_Zic1_2/Jaspar

Match Rank:10
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--TCCGGCGGAG---
TNTCCTGCTGTGNNG