Information for motif1


Reverse Opposite:

p-value:1e-139
log p-value:-3.222e+02
Information Content per bp:1.720
Number of Target Sequences with motif69.0
Percentage of Target Sequences with motif33.17%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.17%
Average Position of motif in Targets26.1 +/- 10.6bp
Average Position of motif in Background14.8 +/- 2.8bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.85
Offset:-2
Orientation:reverse strand
Alignment:--GYCCKGRCATGY
ATGCCCGGGCATGT

p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer

Match Rank:2
Score:0.82
Offset:-5
Orientation:forward strand
Alignment:-----GYCCKGRCATGY---
AACATGCCCAGACATGCCCN

p53(p53)/Saos-p53-ChIP-Seq/Homer

Match Rank:3
Score:0.82
Offset:-5
Orientation:forward strand
Alignment:-----GYCCKGRCATGY---
AACATGCCCAGACATGCCCN

p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer

Match Rank:4
Score:0.80
Offset:-5
Orientation:reverse strand
Alignment:-----GYCCKGRCATGY---
NGCATGTCNNGACATGCNNN

MA0106.2_TP53/Jaspar

Match Rank:5
Score:0.79
Offset:-3
Orientation:reverse strand
Alignment:---GYCCKGRCATGY
CATGTCTGGGCATGT

MA0525.1_TP63/Jaspar

Match Rank:6
Score:0.79
Offset:-6
Orientation:forward strand
Alignment:------GYCCKGRCATGY--
AGACATGCCCAGACATGCCC

MA0146.2_Zfx/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---GYCCKGRCATGY
GGGGCCGAGGCCTG-

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:8
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GYCCKGRCATGY
--CCWGGAATGY

MA0259.1_HIF1A::ARNT/Jaspar

Match Rank:9
Score:0.55
Offset:4
Orientation:forward strand
Alignment:GYCCKGRCATGY
----GGACGTGC

Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer

Match Rank:10
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----GYCCKGRCATGY---
AACCGGTTNNAACCGGTTTN