Information for motif13


Reverse Opposite:

p-value:1e-11
log p-value:-2.762e+01
Information Content per bp:1.820
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif4.81%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets24.5 +/- 12.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0008.1_E2F2_1/Jaspar

Match Rank:1
Score:0.89
Offset:-4
Orientation:forward strand
Alignment:----AGGCGCGC---
ATAAAGGCGCGCGAT

PB0009.1_E2F3_1/Jaspar

Match Rank:2
Score:0.86
Offset:-4
Orientation:forward strand
Alignment:----AGGCGCGC---
ATAAGGGCGCGCGAT

POL006.1_BREu/Jaspar

Match Rank:3
Score:0.84
Offset:1
Orientation:reverse strand
Alignment:AGGCGCGC-
-GGCGCGCT

PB0095.1_Zfp161_1/Jaspar

Match Rank:4
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--AGGCGCGC------
TGGCGCGCGCGCCTGA

PB0180.1_Sp4_2/Jaspar

Match Rank:5
Score:0.68
Offset:-3
Orientation:forward strand
Alignment:---AGGCGCGC----
CAAAGGCGTGGCCAG

PB0199.1_Zfp161_2/Jaspar

Match Rank:6
Score:0.67
Offset:1
Orientation:forward strand
Alignment:AGGCGCGC-------
-GCCGCGCAGTGCGT

PB0151.1_Myf6_2/Jaspar

Match Rank:7
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------AGGCGCGC-
AGCAACAGCCGCACC

PB0164.1_Smad3_2/Jaspar

Match Rank:8
Score:0.63
Offset:-5
Orientation:reverse strand
Alignment:-----AGGCGCGC----
NAGANTGGCGGGGNGNA

MA0516.1_SP2/Jaspar

Match Rank:9
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------AGGCGCGC-
GGGNGGGGGCGGGGC

PB0052.1_Plagl1_1/Jaspar

Match Rank:10
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----AGGCGCGC----
TTGGGGGCGCCCCTAG