Information for motif16


Reverse Opposite:

p-value:1e-8
log p-value:-2.063e+01
Information Content per bp:1.857
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif3.85%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.08%
Average Position of motif in Targets23.9 +/- 15.9bp
Average Position of motif in Background29.6 +/- 7.4bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:TAGTGTGG----
NNHTGTGGTTWN

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:2
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--TAGTGTGG--
NTGGGTGTGGCC

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-TAGTGTGG-
TGGGTGTGGC

MA0130.1_ZNF354C/Jaspar

Match Rank:4
Score:0.70
Offset:4
Orientation:reverse strand
Alignment:TAGTGTGG--
----GTGGAT

MA0493.1_Klf1/Jaspar

Match Rank:5
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-TAGTGTGG--
TGGGTGTGGCN

MA0002.2_RUNX1/Jaspar

Match Rank:6
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TAGTGTGG---
GTCTGTGGTTT

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:7
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:TAGTGTGG----
--CTGTGGTTTN

MA0511.1_RUNX2/Jaspar

Match Rank:8
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---TAGTGTGG----
GGGGTTTGTGGTTTG

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski et al.)/Homer

Match Rank:9
Score:0.66
Offset:1
Orientation:forward strand
Alignment:TAGTGTGG---
-GCTGTGGTTT

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:10
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TAGTGTGG---
-NNTGTGGTTT