Information for motif20


Reverse Opposite:

p-value:1e-13
log p-value:-3.100e+01
Information Content per bp:1.627
Number of Target Sequences with motif27.0
Percentage of Target Sequences with motif14.84%
Number of Background Sequences with motif4.8
Percentage of Background Sequences with motif2.82%
Average Position of motif in Targets27.2 +/- 13.6bp
Average Position of motif in Background21.9 +/- 8.9bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.16
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0022.1_Gata5_1/Jaspar

Match Rank:1
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---TCTGATGA------
TAAACTGATAAGAAGAT

Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TCTGATGA--
NBWGATAAGR

MA0496.1_MAFK/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TCTGATGA-----
AAANTGCTGACTNAG

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---TCTGATGA----
AAAWWTGCTGACWWD

MA0089.1_NFE2L1::MafG/Jaspar

Match Rank:5
Score:0.65
Offset:3
Orientation:forward strand
Alignment:TCTGATGA-
---CATGAC

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:6
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TCTGATGA---
-ATGATGCAAT

GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer

Match Rank:7
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TCTGATGA--
--AGATAASR

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:8
Score:0.63
Offset:-6
Orientation:forward strand
Alignment:------TCTGATGA---
ATTTCCTTTGATCTATA

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:9
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TCTGATGA---
-MTGATGCAAT

MA0495.1_MAFF/Jaspar

Match Rank:10
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TCTGATGA------
NAAAANTGCTGACTCAGC