Information for motif3


Reverse Opposite:

p-value:1e-23
log p-value:-5.490e+01
Information Content per bp:1.889
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif8.17%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets25.8 +/- 12.5bp
Average Position of motif in Background20.1 +/- 5.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0086.1_Irx5/Jaspar

Match Rank:1
Score:0.82
Offset:-4
Orientation:reverse strand
Alignment:----GAACATGT-----
ANTNNTACATGTANNTN

PH0085.1_Irx4/Jaspar

Match Rank:2
Score:0.80
Offset:-3
Orientation:forward strand
Alignment:---GAACATGT------
AATATACATGTAAAACA

PH0083.1_Irx3_1/Jaspar

Match Rank:3
Score:0.79
Offset:-3
Orientation:forward strand
Alignment:---GAACATGT------
AAAATACATGTAATACT

PH0084.1_Irx3_2/Jaspar

Match Rank:4
Score:0.79
Offset:-3
Orientation:forward strand
Alignment:---GAACATGT------
AATATACATGTAATATA

PH0082.1_Irx2/Jaspar

Match Rank:5
Score:0.78
Offset:-3
Orientation:forward strand
Alignment:---GAACATGT------
TAAATACATGTAAAATT

PH0087.1_Irx6/Jaspar

Match Rank:6
Score:0.76
Offset:-3
Orientation:forward strand
Alignment:---GAACATGT------
AAAATACATGTAAAAAT

MA0058.2_MAX/Jaspar

Match Rank:7
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--GAACATGT
AAGCACATGG

MA0091.1_TAL1::TCF3/Jaspar

Match Rank:8
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GAACATGT---
CGACCATCTGTT

POL005.1_DPE/Jaspar

Match Rank:9
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GAACATGT-
GAAGATGTT

PB0047.1_Myf6_1/Jaspar

Match Rank:10
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---GAACATGT-----
GAAGAACAGGTGTCCG