Information for motif4


Reverse Opposite:

p-value:1e-18
log p-value:-4.275e+01
Information Content per bp:1.659
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif6.73%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.25%
Average Position of motif in Targets29.1 +/- 12.3bp
Average Position of motif in Background31.4 +/- 6.7bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

MA0522.1_Tcf3/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:AGAGCAGCTCTG
-NTGCAGCTGTG

Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AGAGCAGCTCTG
-BAACAGCTGT-

Tcf12(HLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AGAGCAGCTCTG
-CAGCAGCTGN-

MyoD(HLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AGAGCAGCTCTG
NNAGCAGCTGCT

MyoG(HLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer

Match Rank:5
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:AGAGCAGCTCTG
----CAGCTGTT

MA0521.1_Tcf12/Jaspar

Match Rank:6
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGAGCAGCTCTG
-NNGCAGCTGTT

SCL(HLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:AGAGCAGCTCTG
-CAGCTGNT---

MA0500.1_Myog/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:AGAGCAGCTCTG
-NNGCAGCTGTC

PB0051.1_Osr2_1/Jaspar

Match Rank:9
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----AGAGCAGCTCTG
ATGTACAGTAGCAAAG

PB0003.1_Ascl2_1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--AGAGCAGCTCTG---
NNNNAGCAGCTGCTGAN