p-value: | 1e-17 |
log p-value: | -3.995e+01 |
Information Content per bp: | 1.697 |
Number of Target Sequences with motif | 16.0 |
Percentage of Target Sequences with motif | 7.69% |
Number of Background Sequences with motif | 2.4 |
Percentage of Background Sequences with motif | 0.35% |
Average Position of motif in Targets | 28.7 +/- 13.5bp |
Average Position of motif in Background | 27.7 +/- 4.7bp |
Strand Bias (log2 ratio + to - strand density) | -0.6 |
Multiplicity (# of sites on avg that occur together) | 1.15 |
Motif File: | file (matrix) reverse opposite |
PDF Format Logos: | forward logo reverse opposite |
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 1 |
Score: | 0.68 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | TGTTCAGACA- ---BCAGACWA |
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PB0060.1_Smad3_1/Jaspar
Match Rank: | 2 |
Score: | 0.66 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TGTTCAGACA----- CAAATCCAGACATCACA |
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Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer
Match Rank: | 3 |
Score: | 0.64 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | TGTTCAGACA- ---CCAGACAG |
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MA0106.2_TP53/Jaspar
Match Rank: | 4 |
Score: | 0.63 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---TGTTCAGACA-- ACATGCCCAGACATG |
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PB0104.1_Zscan4_1/Jaspar
Match Rank: | 5 |
Score: | 0.62 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----TGTTCAGACA--- TACATGTGCACATAAAA |
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Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer
Match Rank: | 6 |
Score: | 0.62 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | TGTTCAGACA--- ---CCAGACRSVB |
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Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer
Match Rank: | 7 |
Score: | 0.59 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -TGTTCAGACA- HTGCTGAGTCAT |
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PB0026.1_Gm397_1/Jaspar
Match Rank: | 8 |
Score: | 0.59 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----TGTTCAGACA--- CAGATGTGCACATACGT |
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Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer
Match Rank: | 9 |
Score: | 0.58 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --TGTTCAGACA CNTGTTTACATA |
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NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer
Match Rank: | 10 |
Score: | 0.58 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGTTCAGACA-- TGCTGAGTCATC |
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