Information for motif9


Reverse Opposite:

p-value:1e-13
log p-value:-3.127e+01
Information Content per bp:1.719
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif5.29%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets25.6 +/- 13.2bp
Average Position of motif in Background30.9 +/- 7.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.18
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.90
Offset:-1
Orientation:forward strand
Alignment:-TGCCCAGGGG-
GTCCCCAGGGGA

MA0154.2_EBF1/Jaspar

Match Rank:2
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:TGCCCAGGGG--
-TCCCTGGGGAN

MA0524.1_TFAP2C/Jaspar

Match Rank:3
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:TGCCCAGGGG-----
TGCCCTGGGGCNANN

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:4
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-TGCCCAGGGG-
NGTCCCNNGGGA

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:5
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-TGCCCAGGGG---
NTGCCCANNGGTNA

PB0102.1_Zic2_1/Jaspar

Match Rank:6
Score:0.73
Offset:-2
Orientation:reverse strand
Alignment:--TGCCCAGGGG---
ACCCCCCCGGGGGGN

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:7
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-TGCCCAGGGG---
NTGCCCTAGGGCAA

PB0103.1_Zic3_1/Jaspar

Match Rank:8
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--TGCCCAGGGG---
NCCCCCCCGGGGGGN

MA0003.2_TFAP2A/Jaspar

Match Rank:9
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:TGCCCAGGGG-----
TGCCCTGAGGCANTN

AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.70
Offset:-1
Orientation:forward strand
Alignment:-TGCCCAGGGG-
ATGCCCTGAGGC