Information for motif1


Reverse Opposite:

p-value:1e-94
log p-value:-2.173e+02
Information Content per bp:1.627
Number of Target Sequences with motif70.0
Percentage of Target Sequences with motif24.65%
Number of Background Sequences with motif2.0
Percentage of Background Sequences with motif0.50%
Average Position of motif in Targets27.5 +/- 12.1bp
Average Position of motif in Background6.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.9
Multiplicity (# of sites on avg that occur together)1.19
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0164.1_Smad3_2/Jaspar

Match Rank:1
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CGGACCGC-------
TACGCCCCGCCACTCTG

Sp1(Zf)/Promoter/Homer

Match Rank:2
Score:0.60
Offset:0
Orientation:forward strand
Alignment:CGGACCGC----
GGCCCCGCCCCC

MA0516.1_SP2/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CGGACCGC--------
-GCCCCGCCCCCTCCC

PB0008.1_E2F2_1/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CGGACCGC------
NTCGCGCGCCTTNNN

POL013.1_MED-1/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CGGACCGC
CGGAGC--

PB0009.1_E2F3_1/Jaspar

Match Rank:6
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CGGACCGC---
ATAAGGGCGCGCGAT

POL006.1_BREu/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CGGACCGC-
-AGCGCGCC

MA0024.2_E2F1/Jaspar

Match Rank:8
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:CGGACCGC---
CCTCCCGCCCN

PB0202.1_Zfp410_2/Jaspar

Match Rank:9
Score:0.53
Offset:-1
Orientation:forward strand
Alignment:-CGGACCGC--------
TCACCCCGCCCCAAATT

MA0470.1_E2F4/Jaspar

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CGGACCGC--
NNTTCCCGCCC