Information for motif15


Reverse Opposite:

p-value:1e-19
log p-value:-4.400e+01
Information Content per bp:1.535
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif6.34%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.44%
Average Position of motif in Targets25.9 +/- 11.0bp
Average Position of motif in Background22.9 +/- 3.7bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:1
Score:0.68
Offset:-2
Orientation:reverse strand
Alignment:--GCCTTYTGGCCC
NTGCCCTTGGGCGN

MA0163.1_PLAG1/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GCCTTYTGGCCC-
CCCCCTTGGGCCCC

PPARE(NR/DR1)/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GCCTTYTGGCCC-
TGACCTTTGCCCCA

MA0065.2_PPARG::RXRA/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCCTTYTGGCCC--
TGACCTTTGCCCTAN

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:5
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GCCTTYTGGCCC
NTGCCCTAGGGCAA

RXR(NR/DR1)/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCCTTYTGGCCC-
TGACCTTTGCCCTA

PB0112.1_E2F2_2/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GCCTTYTGGCCC------
-NNNNTTGGCGCCGANNN

PB0113.1_E2F3_2/Jaspar

Match Rank:8
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:GCCTTYTGGCCC------
-NNNNTTGGCGCCGANNN

MA0161.1_NFIC/Jaspar

Match Rank:9
Score:0.56
Offset:5
Orientation:forward strand
Alignment:GCCTTYTGGCCC
-----TTGGCA-

NFY(CCAAT)/Promoter/Homer

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GCCTTYTGGCCC
-CCGATTGGCT-