Information for motif18


Reverse Opposite:

p-value:1e-16
log p-value:-3.754e+01
Information Content per bp:1.619
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif7.04%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.69%
Average Position of motif in Targets21.8 +/- 14.6bp
Average Position of motif in Background32.3 +/- 8.6bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GGCGACTT
GGCGCGCT

PB0113.1_E2F3_2/Jaspar

Match Rank:2
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------GGCGACTT---
NNNNTTGGCGCCGANNN

PB0154.1_Osr1_2/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GGCGACTT-----
ACATGCTACCTAATAC

PB0112.1_E2F2_2/Jaspar

Match Rank:4
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------GGCGACTT---
NNNNTTGGCGCCGANNN

MA0122.1_Nkx3-2/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GGCGACTT--
-NCCACTTAN

PB0155.1_Osr2_2/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GGCGACTT-----
ACTTGCTACCTACACC

PB0008.1_E2F2_1/Jaspar

Match Rank:7
Score:0.56
Offset:-4
Orientation:reverse strand
Alignment:----GGCGACTT---
NTCGCGCGCCTTNNN

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GGCGACTT------
CTTAACCACTTAAGGAT

PH0171.1_Nkx2-1/Jaspar

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GGCGACTT------
TAAGCCACTTGAAATT

PB0009.1_E2F3_1/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----GGCGACTT---
ANCGCGCGCCCTTNN